Post-processing workstations

Post-processing of image data includes:

• Exporting from propriety formats (e.g., Zeiss CZI or Leica LIF) to TIF images
• stitching of tile scans (montage creation)
• spectral un-mixing of data collected using the Quasar detector on either of the Zeiss LSM880 microscopes
• Airyscan post processing (Zeiss LSM800 confocal/multiphoton - due to software licensing issues, this is only available on the microscope computer)
• SIM post-processing and channel alignment (Zeiss Elyra S.1)
• Deconvolution of Apotome data (Zeiss Axio Observer 7 with Apotome III Microscope)

If users need these post-processing techniques, they are typically covered in the user's training on the specific instrument. The workstations are available for scheduling on iLab to approved users. If you need training or assistance, please feel free to contact us.

• Image Analysis computer workstation (LSN)
• Zeiss SIM post-processing computer workstation (LSN)
• Zeiss LSM880 post-processing computer workstation (Marley)